2OXL
Structure and Function of the E. coli Protein YmgB: a Protein Critical for Biofilm Formation and Acid Resistance
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X6A |
Synchrotron site | NSLS |
Beamline | X6A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-10-25 |
Detector | ADSC QUANTUM 210 |
Wavelength(s) | 0.9790, 0.9793, 0.9322 |
Spacegroup name | C 2 2 21 |
Unit cell lengths | 69.919, 69.945, 55.021 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.800 |
R-factor | 0.21567 |
Rwork | 0.215 |
R-free | 0.23789 |
Structure solution method | MAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.666 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE (2.11) |
Refinement software | REFMAC |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.000 | 1.860 |
High resolution limit [Å] | 1.800 | 1.800 |
Rmerge | 0.038 | 0.403 |
Number of reflections | 12802 | |
<I/σ(I)> | 22.8 | |
Completeness [%] | 99.6 | 96.8 |
Redundancy | 6.6 | 3.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | MICROBATCH | 8 | 295 | 90 mM Tris, 1.8 M NaCl, 0.5 (w/v)% B-OG, pH 8.0, microbatch, temperature 295K |
1 | MICROBATCH | 8 | 295 | 90 mM Tris, 1.8 M NaCl, 0.5 (w/v)% B-OG, pH 8.0, microbatch, temperature 295K |
1 | MICROBATCH | 8 | 295 | 90 mM Tris, 1.8 M NaCl, 0.5 (w/v)% B-OG, pH 8.0, microbatch, temperature 295K |