2OU7
Structure of the Catalytic Domain of Human Polo-like Kinase 1
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 17-ID |
Synchrotron site | APS |
Beamline | 17-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-02-26 |
Detector | ADSC QUANTUM 210 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 65.958, 65.958, 154.045 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 45.900 - 2.400 |
R-factor | 0.20463 |
Rwork | 0.203 |
R-free | 0.23534 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1MQ4 (residues 274-307 deleted). |
RMSD bond length | 0.009 |
RMSD bond angle | 1.246 |
Data reduction software | HKL-2000 |
Data scaling software | HKL-2000 |
Phasing software | MOLREP |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 45.900 | 2.490 |
High resolution limit [Å] | 2.400 | 2.400 |
Number of reflections | 14898 | |
<I/σ(I)> | 23.26 | 1.85 |
Completeness [%] | 71.6 | |
Redundancy | 5.6 | 3.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 277 | Protein buffer: 50 mM HEPES, pH 7.5, 5 mM TCEP. Protein was incubated on ice with 5 mM ligand (1:20 dilution of 100 mM stock in H2O for AMPPNP or DMSO for PHA-680626) for 0.5-1 h, followed by a brief centrifugation step and drop setting at RT (0.5 microliter protein + 0.5 microliter reservoir solution consisting of 500 mM magnesium acetate, 10 % PEG 4000 and 0.3 mM zinc acetate for AMPPNP, VAPOR DIFFUSION, HANGING DROP, temperature 277K |