Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2OT7

Crystal structure of JMJD2A complexed with histone H3 peptide monomethylated at Lys9

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyCCD
Collection date2007-02-02
DetectorADSC QUANTUM 315
Wavelength(s)1.0723
Spacegroup nameP 21 21 2
Unit cell lengths101.209, 149.842, 57.470
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 2.135
R-factor0.18909
Rwork0.187
R-free0.24072
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)2oq7
RMSD bond length0.012
RMSD bond angle1.330
Data reduction softwareMOSFLM
Data scaling softwareCCP4 ((SCALA))
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]83.9202.250
High resolution limit [Å]2.1352.135
Rmerge0.0720.541
Number of reflections48784
<I/σ(I)>11.92
Completeness [%]99.1100
Redundancy2.93
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5.527720% PEG 3350, 100 mM Citrate, 2 mM NiCl, pH 5.5, VAPOR DIFFUSION, SITTING DROP, temperature 277K

231356

PDB entries from 2025-02-12

PDB statisticsPDBj update infoContact PDBjnumon