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2ODR

Methanococcus Maripaludis Phosphoseryl-tRNA synthetase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.2.2
Synchrotron siteALS
Beamline8.2.2
Temperature [K]100
Detector technologyCCD
DetectorADSC QUANTUM 210
Wavelength(s)1.00390
Spacegroup nameP 21 21 21
Unit cell lengths119.172, 133.943, 208.382
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 3.228
R-factor0.292
Rwork0.292
R-free0.30600
Structure solution methodMIR
RMSD bond length0.008
RMSD bond angle1.040
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE (2.06)
Refinement softwareREFMAC
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0003.310
High resolution limit [Å]3.2003.200
Rmerge0.0530.907
Number of reflections53215
<I/σ(I)>111.1
Completeness [%]98.894.4
Redundancy3.73.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5298Well:4-6% PEG 35,000, 5 mM DTT, 100 mM Sodium MES (pH 6.5), 5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 298K
1VAPOR DIFFUSION, HANGING DROP6.5298Well:4-6% PEG 35,000, 5 mM DTT, 100 mM Sodium MES (pH 6.5), 5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 298K
1VAPOR DIFFUSION, HANGING DROP6.5298Well:4-6% PEG 35,000, 5 mM DTT, 100 mM Sodium MES (pH 6.5), 5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 298K
1VAPOR DIFFUSION, HANGING DROP6.5298Well:4-6% PEG 35,000, 5 mM DTT, 100 mM Sodium MES (pH 6.5), 5% glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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PDB entries from 2024-05-15

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