Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2NXM

Structure of HIV-1 protease D25N complexed with the rt-rh analogue peptide GLY-ALA-GLN-THR-PHE*TYR-VAL-ASP-GLY-ALA

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]200
Detector technologyIMAGE PLATE
Collection date2005-03-31
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths51.074, 58.535, 61.711
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution42.490 - 2.250
R-factor0.18977
Rwork0.187
R-free0.24386
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1T3R - Crystal Structure of HIV-1 protease bound with TMC114
RMSD bond length0.008
RMSD bond angle1.264
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareREFMAC (5.2)
Data quality characteristics
 Overall
Low resolution limit [Å]42.490
High resolution limit [Å]2.250
Rmerge0.065
Number of reflections8523
<I/σ(I)>10.3
Completeness [%]91.0
Redundancy3.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.2298126mM sodium phosphate pH 6.2; 63mM sodium citrate; 25-35% Ammonium sulphate, VAPOR DIFFUSION, HANGING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon