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2NX2

Crystal structure of protein ypsA from Bacillus subtilis, Pfam DUF1273

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsNSLS BEAMLINE X3A
Synchrotron siteNSLS
BeamlineX3A
Temperature [K]100
Detector technologyCCD
DetectorMAR CCD 165 mm
Wavelength(s)0.9793
Spacegroup nameP 41 21 2
Unit cell lengths51.052, 51.052, 138.220
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution47.890 - 2.000
R-factor0.182
Rwork0.180
R-free0.22400
Structure solution methodSIRAS
RMSD bond length0.013
RMSD bond angle1.308
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHELXD
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.0900.441
Number of reflections13121
<I/σ(I)>26.52.95
Completeness [%]99.9100
Redundancy12.65.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP4.629818 % PEG-4K, Na-Acetate pH 4.6, Ammonium Acetate 0.1M, 0.1M, Ethylene Glycol 10%, Vapor diffusion, Sitting drop, temperature 298K
1VAPOR DIFFUSION, SITTING DROP4.629818 % PEG-4K, Na-Acetate pH 4.6, Ammonium Acetate 0.1M, 0.1M, Ethylene Glycol 10%, Vapor diffusion, Sitting drop, temperature 298K
1VAPOR DIFFUSION, SITTING DROP4.629818 % PEG-4K, Na-Acetate pH 4.6, Ammonium Acetate 0.1M, 0.1M, Ethylene Glycol 10%, Vapor diffusion, Sitting drop, temperature 298K

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