2NWG
Structure of CXCL12:heparin disaccharide complex
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.5418 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 36.492, 56.965, 71.747 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 23.340 - 2.070 |
R-factor | 0.241 |
Rwork | 0.240 |
R-free | 0.26500 |
Structure solution method | MOLECULAR REPLACEMENT |
RMSD bond length | 0.025 |
RMSD bond angle | 2.519 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 25.582 | 26.470 | 2.180 |
High resolution limit [Å] | 2.070 | 6.550 | 2.070 |
Rmerge | 0.057 | 0.034 | 0.367 |
Total number of observations | 2035 | 9045 | |
Number of reflections | 9627 | ||
<I/σ(I)> | 31.9 | 15.6 | 2 |
Completeness [%] | 99.9 | 98.3 | 100 |
Redundancy | 6.3 | 5.8 | 6.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Soaking | 8.5 | 298 | Grown in 2M Ammonium Sulfate, 0.1M TrisHCl pH 8.50. Soaked in 20 mM PEG-8000, 1M TrisHCl pH 8.5, 16 mM disaccharide. , Soaking, temperature 298K |