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2NWG

Structure of CXCL12:heparin disaccharide complex

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 21 21 21
Unit cell lengths36.492, 56.965, 71.747
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution23.340 - 2.070
R-factor0.241
Rwork0.240
R-free0.26500
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.025
RMSD bond angle2.519
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]25.58226.4702.180
High resolution limit [Å]2.0706.5502.070
Rmerge0.0570.0340.367
Total number of observations20359045
Number of reflections9627
<I/σ(I)>31.915.62
Completeness [%]99.998.3100
Redundancy6.35.86.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Soaking8.5298Grown in 2M Ammonium Sulfate, 0.1M TrisHCl pH 8.50. Soaked in 20 mM PEG-8000, 1M TrisHCl pH 8.5, 16 mM disaccharide. , Soaking, temperature 298K

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PDB entries from 2024-05-15

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