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2NV2

Structure of the PLP synthase complex Pdx1/2 (YaaD/E) from Bacillus subtilis

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID29
Synchrotron siteESRF
BeamlineID29
Temperature [K]100
Detector technologyCCD
Collection date2005-09-17
DetectorADSC QUANTUM 210
Wavelength(s)0.97626
Spacegroup nameP 1 21 1
Unit cell lengths93.507, 259.009, 144.962
Unit cell angles90.00, 92.13, 90.00
Refinement procedure
Resolution50.000 - 2.120
R-factor0.14868
Rwork0.146
R-free0.19789
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2nv1
RMSD bond length0.014
RMSD bond angle1.452
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.140
High resolution limit [Å]2.1202.120
Number of reflections381798
<I/σ(I)>122.1
Completeness [%]98.298.4
Redundancy3.13.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP729815-17% PEG 4000, 200mM tri-ammonium citrate pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 298K

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