Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2JDZ

Crystal structure of recombinant Dioclea guianensis lectin complexed with 5-bromo-4-chloro-3-indolyl-a-D-mannose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID23-1
Synchrotron siteESRF
BeamlineID23-1
Temperature [K]100
Detector technologyCCD
Collection date2005-09-04
DetectorMARRESEARCH
Spacegroup nameI 41 2 2
Unit cell lengths89.222, 89.222, 106.069
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution34.140 - 2.100
R-factor0.2
Rwork0.196
R-free0.24900
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1h9p
RMSD bond length0.014
RMSD bond angle1.658
Data reduction softwareMOSFLM
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0019)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]34.1002.210
High resolution limit [Å]2.1002.100
Rmerge0.0800.300
Number of reflections12834
<I/σ(I)>5.62.1
Completeness [%]99.9100
Redundancy10.410.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP6.5CRYSTALS WERE GROWN BY THE HANGING DROP VAPOUR DIFFUSION METHOD USING 30% PEG 400, 0.1M MES, PH 6.5 AND 0.1M CDCL2.

220113

PDB entries from 2024-05-22

PDB statisticsPDBj update infoContact PDBjnumon