Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2IFU

Crystal Structure of a Gamma-SNAP from Danio rerio

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 23-ID-D
Synchrotron siteAPS
Beamline23-ID-D
Temperature [K]100
Detector technologyCCD
Collection date2006-08-24
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97926
Spacegroup nameP 21 21 21
Unit cell lengths83.378, 90.813, 264.173
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.053 - 2.600
R-factor0.24
Rwork0.239
R-free0.26100
Structure solution methodMAD
RMSD bond length0.017
RMSD bond angle1.469
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHARP
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]40.05340.0502.460
High resolution limit [Å]2.4005.9202.400
Rmerge0.0930.0680.568
Number of reflections70210
<I/σ(I)>11.7591.19
Completeness [%]88.398.553.4
Redundancy9.811.33.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP277Protein Solution (10 MG/ML protein, 0.250 M sodium chloride, 0.0031 M sodium azide, 0.0003 M TCEP, 0.005 M BisTris pH 7.0) mixed in a 1:1 ratio with the Well Solution (15% PEG 8K, 0.020 M lithium sulfate, 0.066 M PIPES pH 6.5, 0.034 M MOPS pH 7.0) Cryoprotected with Well Solution supplemented with up to 25% ethylene glycol, vapor diffusion, hanging drop, temperature 277K
1VAPOR DIFFUSION, HANGING DROP277Protein Solution (10 MG/ML protein, 0.250 M sodium chloride, 0.0031 M sodium azide, 0.0003 M TCEP, 0.005 M BisTris pH 7.0) mixed in a 1:1 ratio with the Well Solution (15% PEG 8K, 0.020 M lithium sulfate, 0.066 M PIPES pH 6.5, 0.034 M MOPS pH 7.0) Cryoprotected with Well Solution supplemented with up to 25% ethylene glycol, vapor diffusion, hanging drop, temperature 277K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon