Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2I3F

Crystal Structure of a Glycolipid transfer-like protein from Galdieria sulphuraria

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 22-ID
Synchrotron siteAPS
Beamline22-ID
Temperature [K]100
Detector technologyCCD
Collection date2006-08-04
DetectorMARMOSAIC 300 mm CCD
Wavelength(s)0.97925
Spacegroup nameC 1 2 1
Unit cell lengths118.438, 48.195, 89.411
Unit cell angles90.00, 115.06, 90.00
Refinement procedure
Resolution43.963 - 1.380
R-factor0.184
Rwork0.182
R-free0.21300
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)FFAS03 homology model based on PDB 1tfj
RMSD bond length0.020
RMSD bond angle1.781
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallInner shellOuter shell
Low resolution limit [Å]43.96343.9631.430
High resolution limit [Å]1.3802.9701.380
Rmerge0.0360.0280.246
Number of reflections93177
<I/σ(I)>17.4743.754
Completeness [%]99.198.892.4
Redundancy3.63.72.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293PROTEIN SOLUTION (10 MG/ML PROTEIN, 0.050 M SODIUM CHLORIDE, 0.0003 M TCEP, 0.005 M Tris PH 8.0) MIXED IN A 1:1 RATIO WITH THE WELL SOLUTION (16% PEG 1.5K, 0.050 M HEPES pH 7.5) CRYOPROTECTED WITH WELL SOLUTION WITH 20% glycerol, vapor diffusion, hanging drop, temperature 293K
1VAPOR DIFFUSION, HANGING DROP293PROTEIN SOLUTION (10 MG/ML PROTEIN, 0.050 M SODIUM CHLORIDE, 0.0003 M TCEP, 0.005 M Tris PH 8.0) MIXED IN A 1:1 RATIO WITH THE WELL SOLUTION (16% PEG 1.5K, 0.050 M HEPES pH 7.5) CRYOPROTECTED WITH WELL SOLUTION WITH 20% glycerol, vapor diffusion, hanging drop, temperature 293K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon