2I2O
Crystal Structure of an eIF4G-like Protein from Danio rerio
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 22-ID |
Synchrotron site | APS |
Beamline | 22-ID |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2006-08-04 |
Detector | MARMOSAIC 300 mm CCD |
Wavelength(s) | 0.97925 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 317.796, 40.948, 40.917 |
Unit cell angles | 90.00, 90.26, 90.00 |
Refinement procedure
Resolution | 40.612 - 1.920 |
R-factor | 0.192 |
Rwork | 0.190 |
R-free | 0.23500 |
Structure solution method | SAD |
RMSD bond length | 0.015 |
RMSD bond angle | 1.357 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.612 | 40.610 | 1.990 |
High resolution limit [Å] | 1.920 | 4.140 | 1.920 |
Rmerge | 0.074 | 0.054 | 0.245 |
Number of reflections | 39789 | ||
<I/σ(I)> | 13.377 | 5.769 | |
Completeness [%] | 97.5 | 100 | 95.5 |
Redundancy | 6.4 | 7.1 | 5.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 293 | PROTEIN SOLUTION (10 MG/ML PROTEIN, 0.050 M SODIUM CHLORIDE, 0.003 M SODIUM AZIDE, 0.0003 M TCEP, 0.005 M BisTris PH 7.0) MIXED IN A 1:1 RATIO WITH THE WELL SOLUTION (7% PEG 4K, 0.40 M sodium chloride, 0.1 M MES/Acetate pH 5.5) CRYOPROTECTED WITH 10% PEG 4K, 0.1 M MES/Acetate pH 5.5, 25% Ethylene glycol, vapor diffusion, hanging drop, temperature 293K |