2H0N
Structure of the fully modified left-handed cyclohexene nucleic acid sequence GTGTACAC
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-03-18 |
Detector | MAR CCD 165 mm |
Wavelength(s) | 0.8126 |
Spacegroup name | H 3 2 |
Unit cell lengths | 41.455, 41.455, 65.580 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 20.000 - 1.530 |
R-factor | 0.2004 |
Rwork | 0.158 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1.60A P 32 1 2 STRUCTURE OF H(GTGTACAC) (NDB CODE HD0001) WAS USED AS MODEL |
RMSD bond length | 0.019 |
RMSD bond angle | 0.025 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.580 |
High resolution limit [Å] | 1.530 | 1.530 |
Rmerge | 0.108 | 0.376 |
Number of reflections | 3396 | |
<I/σ(I)> | 9.8 | 5.58 |
Completeness [%] | 98.6 | |
Redundancy | 15 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7 | 289 | CRYSTALS WERE OBTAINED FROM A SOLUTION THAT CONTAINED CACODYLATE BUFFER, LICL, SRCL2, MGCL2, SPERMINE TETRACHLORIDE, AND MPD, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 289K |
Crystallization Reagents
ID | crystal ID | solution ID | reagent name | concentration | details |
1 | 1 | 1 | CACODYLATE | ||
10 | 1 | 2 | LICL | ||
11 | 1 | 2 | SRCL2 | ||
12 | 1 | 2 | MGCL2 | ||
13 | 1 | 2 | MPD | ||
2 | 1 | 1 | LICL | ||
3 | 1 | 1 | SRCL2 | ||
4 | 1 | 1 | MGCL2 | ||
5 | 1 | 1 | SPERMINE | ||
6 | 1 | 1 | TETRACHLORIDE | ||
7 | 1 | 1 | MPD | ||
8 | 1 | 1 | H2O | ||
9 | 1 | 2 | CACODYLATE |