Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2GDV

Sucrose phosphorylase from BIFIDOBACTERIUM ADOLESCENTIS reacted with sucrose

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsEMBL/DESY, HAMBURG BEAMLINE BW7B
Synchrotron siteEMBL/DESY, HAMBURG
BeamlineBW7B
Temperature [K]120
Detector technologyIMAGE PLATE
Collection date2003-08-03
DetectorMAR scanner 345 mm plate
Wavelength(s)0.841
Spacegroup nameP 21 21 21
Unit cell lengths75.740, 103.070, 150.690
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.890 - 2.000
R-factor0.2
Rwork0.198
R-free0.23700
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1r7a
RMSD bond length0.012
RMSD bond angle2.300
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.0820.433
Number of reflections80388
<I/σ(I)>21.52.6
Completeness [%]99.696.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8298PEG 4000, SODIUM ACETATE, TRIS, bicine, sucrose, pH 8, VAPOR DIFFUSION, HANGING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon