2G8L
Crystal structure of a duf89 family protein (ph1575) from pyrococcus horikoshii at 2.04 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-12-15 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 1.0000, 0.9796, 0.9797 |
Spacegroup name | P 31 |
Unit cell lengths | 88.859, 88.859, 81.499 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 39.010 - 2.040 |
R-factor | 0.146 |
Rwork | 0.144 |
R-free | 0.18200 |
Structure solution method | MAD |
RMSD bond length | 0.017 |
RMSD bond angle | 1.345 |
Data reduction software | XDS |
Data scaling software | XSCALE |
Phasing software | SHELX |
Refinement software | REFMAC (5.2.0005) |
Data quality characteristics
Overall | Inner shell | Outer shell | |
Low resolution limit [Å] | 40.760 | 2.110 | |
High resolution limit [Å] | 2.040 | 3.480 | 2.040 |
Rmerge | 0.067 | 0.048 | 0.437 |
Number of reflections | 45685 | 4589 | 3925 |
<I/σ(I)> | 12.28 | 21.9 | 2.93 |
Completeness [%] | 99.7 | 99.8 | 96.9 |
Redundancy | 3.78 | 3.39 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP, NANODROP | 4 | 277 | 10.0% MPD, 0.1M Citrate, pH 4.0, VAPOR DIFFUSION, SITTING DROP, NANODROP, temperature 277K |