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2G0C

Structure of the RNA binding domain (residues 404-479) of the Bacillus subtilis YxiN protein

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 5.0.1
Synchrotron siteALS
Beamline5.0.1
Temperature [K]100
Detector technologyCCD
Collection date2004-12-08
DetectorADSC QUANTUM 4
Wavelength(s)0.97858, 0.97910, 0.94643
Spacegroup nameP 41 21 2
Unit cell lengths51.010, 51.010, 64.260
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 1.700
R-factor0.253
Rwork0.253
R-free0.27600
Starting model (for MR)de novo
RMSD bond length0.012
RMSD bond angle1.450
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.760
High resolution limit [Å]1.7001.700
Rmerge0.0260.323
Number of reflections9790941
<I/σ(I)>20.32.8
Completeness [%]99.299.2
Redundancy3.93.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP10291precipitant of 3.2-3.6 M (NH4)2SO4 buffered with 0.1 M glycine, pH 10.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
1VAPOR DIFFUSION, HANGING DROP10291precipitant of 3.2-3.6 M (NH4)2SO4 buffered with 0.1 M glycine, pH 10.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K
1VAPOR DIFFUSION, HANGING DROP10291precipitant of 3.2-3.6 M (NH4)2SO4 buffered with 0.1 M glycine, pH 10.0, VAPOR DIFFUSION, HANGING DROP, temperature 291K

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PDB entries from 2024-05-15

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