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2FRG

Structure of the immunoglobulin-like domain of human TLT-1

Experimental procedure
Source typeROTATING ANODE
Source detailsRIGAKU RU200
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2005-05-24
DetectorMARRESEARCH
Wavelength(s)1.54
Spacegroup nameP 21 21 2
Unit cell lengths47.095, 79.981, 25.780
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 1.190
R-factor0.17711
Rwork0.176
R-free0.19062
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)Hybrid model containing structurally conserved residues of TREM-1 (1SMO chain A) NKp44(1HKF) and D1 domain of polymeric immunoglobulin receptor (1XED chain E).
RMSD bond length0.010
RMSD bond angle1.452
Data scaling softwareSCALEPACK
Phasing softwarePHASER
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0001.230
High resolution limit [Å]1.1901.190
Number of reflections31487
<I/σ(I)>25.93.2
Completeness [%]98.287
Redundancy6.43.5
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.6293Mother liquor contained 15-19% w/w PEG6000, 0.5M Na/K phosphate pH 5.6. Protein solution contained 10mg/ml TLT-1 in 20mM Tris pH 8. Protein and mother liquor were mixed in equal proportions at 15 C, and hanging drops were suspended over mother liquor., VAPOR DIFFUSION, HANGING DROP, temperature 293K
1VAPOR DIFFUSION, HANGING DROP5.6293Mother liquor contained 15-19% w/w PEG6000, 0.5M Na/K phosphate pH 5.6. Protein solution contained 10mg/ml TLT-1 in 20mM Tris pH 8. Protein and mother liquor were mixed in equal proportions at 15 C, and hanging drops were suspended over mother liquor., VAPOR DIFFUSION, HANGING DROP, temperature 293K

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