Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

2F78

BenM effector binding domain with its effector benzoate

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 19-BM
Synchrotron siteAPS
Beamline19-BM
Temperature [K]100
Detector technologyCCD
DetectorMARRESEARCH
Wavelength(s)1.00727
Spacegroup nameP 21 21 21
Unit cell lengths64.386, 69.508, 116.859
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution59.761 - 2.050
R-factor0.183
Rwork0.180
R-free0.24160
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)2f6p
RMSD bond length0.007
RMSD bond angle1.116
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (refmac_5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]59.7612.120
High resolution limit [Å]2.0502.050
Rmerge0.0680.599
Number of reflections32511
<I/σ(I)>25.23.8
Completeness [%]96.797.5
Redundancy4.2
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1microbatch under oil288PEG 4000, ammonium sulfate, sodium acetate, NaCl, tris, glycerol, imidazole, microbatch under oil, temperature 288K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon