Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2EGV

Crystal structure of rRNA methyltransferase with SAM ligand

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-5A
Synchrotron sitePhoton Factory
BeamlineBL-5A
Temperature [K]298
Detector technologyCCD
Collection date2006-10-28
DetectorADSC QUANTUM 210
Wavelength(s)1.0000
Spacegroup nameP 21 21 21
Unit cell lengths62.364, 76.976, 97.762
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.010 - 1.450
R-factor0.218
Rwork0.218
R-free0.24500
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005
RMSD bond angle1.300
Data reduction softwareHKL-2000
Data scaling softwareHKL-2000
Phasing softwareMOLREP
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0001.500
High resolution limit [Å]1.4501.450
Number of reflections79269
<I/σ(I)>21.45952.68627
Completeness [%]94.489.3
Redundancy4.900164.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.52930.2M magnesium acetate tetrahydrate 0.1M sodium cacodylate pH6.5 20% polyethylene glycol 8000 , VAPOR DIFFUSION, SITTING DROP, temperature 293K

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon