2DKB
DIALKYLGLYCINE DECARBOXYLASE STRUCTURE: BIFUNCTIONAL ACTIVE SITE AND ALKALI METAL BINDING SITES
Experimental procedure
Spacegroup name | P 64 2 2 |
Unit cell lengths | 152.700, 152.700, 86.600 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 8.000 - 2.100 |
R-factor | 0.178 |
RMSD bond length | 0.011 |
RMSD bond angle | 2.200 |
Refinement software | TNT |
Data quality characteristics
Overall | |
High resolution limit [Å] | 2.100 * |
Rmerge | 0.078 * |
Number of reflections | 32665 * |
Completeness [%] | 93.0 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion, hanging drop * | 7.5 * | taken from Toney, M.D., (1991) J.Mol.Biol., 222, 873. * |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 20-60 (mg/ml) | |
10 | 1 | reservoir | sodium azide | 0.02 (%) | |
2 | 1 | drop | potassium phosphate | 5 (mM) | |
3 | 1 | drop | PLP | 0.015 (mM) | |
4 | 1 | drop | sodium azide | 0.02 (%(w/v)) | |
5 | 1 | reservoir | morpholinoethanesulfonic acid | 15 (mM) | |
6 | 1 | reservoir | PEG4000 | 15 (%(w/v)) | |
7 | 1 | reservoir | potassium hydroxide | to neutralize | |
8 | 1 | reservoir | sodium pyruvate | 150 (mM) | |
9 | 1 | reservoir | PLP | 0.015 (mM) |