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2DKB

DIALKYLGLYCINE DECARBOXYLASE STRUCTURE: BIFUNCTIONAL ACTIVE SITE AND ALKALI METAL BINDING SITES

Experimental procedure
Spacegroup nameP 64 2 2
Unit cell lengths152.700, 152.700, 86.600
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution8.000 - 2.100
R-factor0.178
RMSD bond length0.011
RMSD bond angle2.200
Refinement softwareTNT
Data quality characteristics
 Overall
High resolution limit [Å]2.100

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Rmerge0.078

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Number of reflections32665

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Completeness [%]93.0

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Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

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7.5

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taken from Toney, M.D., (1991) J.Mol.Biol., 222, 873.

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Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein20-60 (mg/ml)
101reservoirsodium azide0.02 (%)
21droppotassium phosphate5 (mM)
31dropPLP0.015 (mM)
41dropsodium azide0.02 (%(w/v))
51reservoirmorpholinoethanesulfonic acid15 (mM)
61reservoirPEG400015 (%(w/v))
71reservoirpotassium hydroxideto neutralize
81reservoirsodium pyruvate150 (mM)
91reservoirPLP0.015 (mM)

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PDB entries from 2025-06-11

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