2D5N
Crystal structure of a bifunctional deaminase and reductase involved in riboflavin biosynthesis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL12B2 |
Synchrotron site | SPring-8 |
Beamline | BL12B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2005-05-28 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 1.0000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 86.130, 107.952, 186.839 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 30.000 - 2.970 |
R-factor | 0.224 |
Rwork | 0.224 |
R-free | 0.27000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 2b3z |
RMSD bond length | 0.007 |
RMSD bond angle | 1.310 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | CNS |
Refinement software | CNS |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 3.080 |
High resolution limit [Å] | 2.970 | 2.970 |
Rmerge | 0.068 | 0.294 |
Number of reflections | 35885 | |
<I/σ(I)> | 18 | 4 |
Completeness [%] | 98.2 | 98.1 |
Redundancy | 8.7 | 6.4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | 288 | 26.6% polyethylene glycol 400, 5% glycerol, 190mM MgCl2, 95mM HEPES (pH 7.5), VAPOR DIFFUSION, HANGING DROP, temperature 288K |