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2BDP

CRYSTAL STRUCTURE OF BACILLUS DNA POLYMERASE I FRAGMENT COMPLEXED TO 9 BASE PAIRS OF DUPLEX DNA

Experimental procedure
Temperature [K]90
Detector technologyIMAGE PLATE
Collection date1997-03-15
DetectorRIGAKU RAXIS IIC
Spacegroup nameP 21 21 21
Unit cell lengths86.241, 93.275, 106.374
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution20.000 - 1.800
R-factor0.241
Rwork0.241
R-free0.27600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)UNPUBLISHED DNA COMPLEX STRUCTURE
RMSD bond length0.010
RMSD bond angle24.800

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Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareX-PLOR
Refinement softwareX-PLOR (3.843)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0001.830
High resolution limit [Å]1.8001.800
Rmerge0.044

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0.163

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Total number of observations253450

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Number of reflections73375
Completeness [%]91.760.1
Redundancy3.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP5.818

*

drop solution was mixed with an equal volume of reservoir solution

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21reservoirammonium sulfate55 (%(v/v)sat)
31reservoirMES100 (mM)
41reservoirMPD2.5-7.0 (%(v/v))
51reservoirsodium azide0.02 (%(w/v))

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PDB entries from 2024-05-15

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