Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

2B0J

The crystal structure of the apoenzyme of the iron-sulfur-cluster-free hydrogenase (Hmd)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSLS BEAMLINE X10SA
Synchrotron siteSLS
BeamlineX10SA
Temperature [K]100
Detector technologyCCD
Collection date2005-06-24
DetectorMARMOSAIC 225 mm CCD
Wavelength(s)0.97858
Spacegroup nameP 21 21 2
Unit cell lengths91.470, 59.880, 68.490
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution40.000 - 1.750
Rwork0.191
R-free0.21679
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)structure of Hmd from Methanopyrus kandleri
RMSD bond length0.014
RMSD bond angle1.540
Data reduction softwareXDS
Data scaling softwareXDS
Phasing softwareEPMR
Refinement softwareREFMAC (5.2.0005)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0001.795
High resolution limit [Å]1.7501.750
Rmerge0.0750.640
Number of reflections38541
<I/σ(I)>14.12.5
Completeness [%]99.699.8
Redundancy3.84
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5283Hepes/NaOH, 2-propanol, PEG4000, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 283K

245663

PDB entries from 2025-12-03

PDB statisticsPDBj update infoContact PDBjnumon