21JM
Crystal structure of high-molecular-weight PAH dihydrodiol dehydrogenase PahB from Altererythrobacter sp. H2 in complex with substrate
This is a non-PDB format compatible entry.
Experimental procedure
| Experimental method | SINGLE WAVELENGTH |
| Source type | SYNCHROTRON |
| Source details | SSRF BEAMLINE BL18U1 |
| Synchrotron site | SSRF |
| Beamline | BL18U1 |
| Temperature [K] | 100 |
| Detector technology | PIXEL |
| Collection date | 2023-07-01 |
| Detector | DECTRIS PILATUS3 S 6M |
| Wavelength(s) | 0.97853 |
| Spacegroup name | I 2 2 2 |
| Unit cell lengths | 74.837, 79.310, 94.427 |
| Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
| Resolution | 35.666 - 1.350 |
| R-factor | 0.1459 |
| Rwork | 0.145 |
| R-free | 0.15950 |
| Structure solution method | MOLECULAR REPLACEMENT |
| RMSD bond length | 0.008 |
| RMSD bond angle | 1.145 |
| Data reduction software | HKL-2000 |
| Data scaling software | Aimless |
| Phasing software | PHASER |
| Refinement software | PHENIX ((1.14_3260: ???)) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 39.650 | 1.370 |
| High resolution limit [Å] | 1.350 | 1.350 |
| Rmerge | 0.070 | 0.548 |
| Rmeas | 0.073 | 0.580 |
| Rpim | 0.020 | 0.182 |
| Total number of observations | 782687 | 27341 |
| Number of reflections | 61070 | 2863 |
| <I/σ(I)> | 23.5 | 4.9 |
| Completeness [%] | 98.9 | |
| Redundancy | 12.8 | 9.5 |
| CC(1/2) | 0.999 | 0.900 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, SITTING DROP | 298 | ammonium chloride, PEG 3350 |






