1ZA3
The crystal structure of the YSd1 Fab bound to DR5
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 19-BM |
Synchrotron site | APS |
Beamline | 19-BM |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-06-14 |
Detector | CUSTOM-MADE |
Wavelength(s) | 0.92086 |
Spacegroup name | P 32 2 1 |
Unit cell lengths | 147.059, 147.059, 144.947 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 30.000 - 3.350 |
R-factor | 0.22975 |
Rwork | 0.224 |
R-free | 0.28028 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1FVE variants |
RMSD bond length | 0.012 |
RMSD bond angle | 1.339 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | PHASER |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 3.470 |
High resolution limit [Å] | 3.350 | 3.350 |
Number of reflections | 26539 | |
<I/σ(I)> | 8.3 | 4.2 |
Completeness [%] | 99.7 | 99.8 |
Redundancy | 5.6 | 5.7 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.4 | 292 | 20% PEG 8000, 0.2M MgAcetate, 0.1M NaCacodylate pH 6.2-6.6, pH 6.4, VAPOR DIFFUSION, HANGING DROP, temperature 292K |