Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YRQ

Structure of the ready oxidized form of [NiFe]-hydrogenase

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE ID14-2
Synchrotron siteESRF
BeamlineID14-2
Temperature [K]100
Detector technologyCCD
Collection date2001-04-14
DetectorADSC QUANTUM 4
Spacegroup nameP 1 21 1
Unit cell lengths127.500, 99.700, 183.200
Unit cell angles90.00, 91.80, 90.00
Refinement procedure
Resolution20.000 - 2.100
R-factor0.173
Rwork0.171
R-free0.22000
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1yqw
RMSD bond length0.011
RMSD bond angle1.339
Data scaling softwareXDS
Phasing softwareAMoRE
Refinement softwareREFMAC (5.1.27)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.170
High resolution limit [Å]2.1002.100
Number of reflections233855
<I/σ(I)>9.74.4
Completeness [%]87.561.9
Redundancy3.32.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
16.3293PEG 6000, MES buffer, glycerol, Tris-HCL, pH 6.3, VAPOR DIFFUSION, HANGING DROP, temperature 293K, pH 6.30

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon