1YPX
Crystal Structure of the Putative Vitamin-B12 Independent Methionine Synthase from Listeria monocytogenes, Northeast Structural Genomics Target LmR13
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | NSLS BEAMLINE X4A |
Synchrotron site | NSLS |
Beamline | X4A |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2004-08-21 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9791 |
Spacegroup name | I 41 |
Unit cell lengths | 139.109, 139.109, 38.535 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 29.640 - 2.600 |
R-factor | 0.233 |
Rwork | 0.233 |
R-free | 0.30800 |
Structure solution method | SAD |
RMSD bond length | 0.008 |
RMSD bond angle | 1.200 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SnB |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 30.000 | 2.690 |
High resolution limit [Å] | 2.600 | 2.600 |
Rmerge | 0.043 | 0.319 |
Number of reflections | 21647 | |
<I/σ(I)> | 19.57 | 4.65 |
Completeness [%] | 97.9 | 97.8 |
Redundancy | 4.45 | 4.5 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 293 | 100mM sodium acetate trihydrate, 30% PEG 2K, 200mM ammonium phosphate, 5mM DTT, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 293K |