Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YID

Crystal structure of tryptophanyl tRNA synthetase II from Deinococcus radiodurans in complex with ATP.

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F2
Synchrotron siteCHESS
BeamlineF2
Temperature [K]193
Detector technologyCCD
Collection date2004-08-06
DetectorADSC QUANTUM 4
Wavelength(s)0.9797
Spacegroup nameC 1 2 1
Unit cell lengths213.560, 58.680, 85.700
Unit cell angles90.00, 96.60, 90.00
Refinement procedure
Resolution30.000 - 2.400
R-factor0.26
Rwork0.260
R-free0.28000
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.006
RMSD bond angle1.500
Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.500
High resolution limit [Å]2.4002.400
Number of reflections20856
Completeness [%]80.080
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP29820% PEG4K, 0.2M DiAMMONIUM HYDROGEN PHOSPHATE, 1mM ATP, VAPOR DIFFUSION, HANGING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon