1YGY
Crystal Structure of D-3-Phosphoglycerate dehydrogenase From Mycobacterium tuberculosis
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | APS BEAMLINE 14-BM-D |
Synchrotron site | APS |
Beamline | 14-BM-D |
Detector technology | CCD |
Collection date | 2003-12-14 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.97937, 0.97961 |
Spacegroup name | P 65 2 2 |
Unit cell lengths | 165.513, 165.513, 218.144 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 48.800 - 2.300 |
R-factor | 0.20715 |
Rwork | 0.205 |
R-free | 0.24853 |
Structure solution method | MAD |
RMSD bond length | 0.012 |
RMSD bond angle | 1.478 |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SHARP |
Refinement software | REFMAC (5.1.24) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.095 | 0.404 |
Number of reflections | 78223 | |
<I/σ(I)> | 24.7 | 4.8 |
Completeness [%] | 99.7 | 99.9 |
Redundancy | 14.3 | 9.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | sodium potassium tartrate, MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 291 | sodium potassium tartrate, MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K |