Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1YFT

The crystal structure of the catalytic fragment of alanyl-tRNA synthetase in complex wtih glycine

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL11-1
Synchrotron siteSSRL
BeamlineBL11-1
Temperature [K]200
Detector technologyCCD
Collection date2004-07-16
DetectorADSC QUANTUM 315
Wavelength(s)0.82653
Spacegroup nameP 41 21 2
Unit cell lengths73.912, 73.912, 172.905
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.230
R-factor0.21
Rwork0.207
R-free0.23900
Structure solution methodFOURIER SYNTHESIS
Starting model (for MR)1riq
RMSD bond length0.018
RMSD bond angle1.431
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.330
High resolution limit [Å]2.2302.230
Rmerge0.0830.440
Number of reflections24100
<I/σ(I)>12
Completeness [%]99.7100
Redundancy5.45.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP6.2298PEG 5000 mme, NaCL, Tris-Cl, Tris-base, glycine, pH 6.2, VAPOR DIFFUSION, SITTING DROP, temperature 298K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon