Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1Y2C

Catalytic Domain Of Human Phosphodiesterase 4D In Complex With 3,5-dimethyl-1-phenyl-1H-pyrazole-4-carboxylic acid ethyl ester

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsALS BEAMLINE 8.3.1
Synchrotron siteALS
Beamline8.3.1
Temperature [K]93
Detector technologyCCD
DetectorADSC QUANTUM 210
Wavelength(s)1.1
Spacegroup nameP 21 21 21
Unit cell lengths60.688, 78.966, 163.510
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution81.650 - 1.670
R-factor0.17733
Rwork0.177
R-free0.19017
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.007
RMSD bond angle1.096
Data scaling softwareELVES
Phasing softwareEPMR
Refinement softwareREFMAC (5.1.25)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]81.6501.713
High resolution limit [Å]1.6701.670
Rmerge0.1190.447
Number of reflections86926
<I/σ(I)>3.61.6
Completeness [%]99.599.9
Redundancy3.73.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7288PEG3350, ethylene glycol, isopropanol, glycerol and DTT, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 288K

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon