Loading
PDBj
MenuPDBj@FacebookPDBj@X(formerly Twitter)PDBj@BlueSkyPDBj@YouTubewwPDB FoundationwwPDBDonate
RCSB PDBPDBeBMRBAdv. SearchSearch help

1XWY

Crystal structure of tatD deoxyribonuclease from Escherichia coli K12 at 2.0 A resolution

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU300
Temperature [K]298
Detector technologyIMAGE PLATE
Collection date2004-09-27
DetectorRIGAKU RAXIS IV
Wavelength(s)1.5418
Spacegroup nameP 41
Unit cell lengths73.885, 73.885, 67.824
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution19.930 - 2.000
R-factor0.171
Rwork0.171
R-free0.21600
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1j6o
RMSD bond length0.011
RMSD bond angle1.500
Data scaling softwareSCALEPACK
Phasing softwareAMoRE
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]20.0002.070
High resolution limit [Å]2.0002.000
Rmerge0.0710.447
Number of reflections22621
<I/σ(I)>23.510
Completeness [%]91.284.3
Redundancy2.22
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP7.52790.1 M Na-HEPES, 1.5 M Lithium Sulfate monohydrate, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 279.0K

246031

PDB entries from 2025-12-10

PDB statisticsPDBj update infoContact PDBjnumon