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1XJ9

Crystal structure of a partly self-complementary peptide nucleic acid (PNA) oligomer showing a duplex-triplex network

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsESRF BEAMLINE BM14
Synchrotron siteESRF
BeamlineBM14
Temperature [K]293
Detector technologyIMAGE PLATE
Collection date1998-02-17
DetectorMARRESEARCH
Wavelength(s)1.0000
Spacegroup nameC 1 2 1
Unit cell lengths55.600, 41.900, 30.100
Unit cell angles90.00, 117.70, 90.00
Refinement procedure
Resolution27.000 - 2.600
Rwork0.255
R-free0.27700
Structure solution methodcrystal 1: single wavelength protocol. crystal 2: MAD protocol with data collected on 5-bromo-uracil derivative crystal at 0.9177, 0.9185, 0.9110, 0.9218 A. the condition for crystal 2 was as follows. collection data: 05-NOV-2000, temperature(kelvin): 110, PH: 4.80, the details of the source of radiation: synchrotron, EMBL/DESY, HAMBURG beamline BW7A
RMSD bond length0.009
RMSD bond angle1.300
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]30.0002.690
High resolution limit [Å]2.6002.600
Rmerge0.0450.183
Number of reflections1839
<I/σ(I)>22.45.3
Completeness [%]98.695.6
Redundancy3
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP293crystal 1: magnesium chloride, PEG 8000, glycerol, VAPOR DIFFUSION, HANGING DROP, temperature 293K
Crystallization Reagents
IDcrystal IDsolution IDreagent nameconcentrationdetails
111magnesium chloride
1021H2O
1122isopropanol
1222calcium chloride
1322acetate
1422H2O
211PEG 8000
311glycerol
411H2O
512PEG 8000
612H2O
721isopropanol
821calcium chloride
921acetate

246031

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