1X9P
The crystal structure of human adenovirus 2 penton base
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ESRF BEAMLINE ID14-1 |
Synchrotron site | ESRF |
Beamline | ID14-1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-05-19 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.934 |
Spacegroup name | C 1 2 1 |
Unit cell lengths | 435.984, 300.168, 420.621 |
Unit cell angles | 90.00, 104.36, 90.00 |
Refinement procedure
Resolution | 20.000 - 3.300 |
R-factor | 0.307 |
Rwork | 0.307 |
R-free | 0.30700 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | electron microscopy map of ad3 dodecahedron |
RMSD bond length | 0.012 |
RMSD bond angle | 1.900 |
Data reduction software | MOSFLM |
Data scaling software | CCP4 ((SCALA)) |
Phasing software | MOLREP |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 25.000 | 3.390 |
High resolution limit [Å] | 3.300 | 3.300 |
Rmerge | 0.210 | 0.470 |
Number of reflections | 447016 | |
<I/σ(I)> | 2.9 | 1.6 |
Completeness [%] | 57.3 | 22 |
Redundancy | 1.5 | 1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 288 | 1.6M Ammonium sulfate, 10% dioxane, 0.1M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 288 | 1.6M Ammonium sulfate, 10% dioxane, 0.1M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K |
1 | VAPOR DIFFUSION, HANGING DROP | 6.5 | 288 | 1.6M Ammonium sulfate, 10% dioxane, 0.1M MES, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 288K |