1VJ1
Crystal structure of putative NADPH-dependent oxidoreductase from Mus musculus at 2.10 A resolution
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | ALS BEAMLINE 8.2.2 |
Synchrotron site | ALS |
Beamline | 8.2.2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-05-09 |
Detector | ADSC |
Wavelength(s) | 0.97950, 0.9793, 0.9567 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 42.386, 91.805, 100.565 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 50.280 - 2.100 |
R-factor | 0.182 |
Rwork | 0.180 |
R-free | 0.21600 |
Structure solution method | MAD |
RMSD bond length | 0.016 |
RMSD bond angle | 1.470 * |
Data reduction software | MOSFLM |
Data scaling software | SCALA (4.2)) |
Phasing software | SOLVE |
Refinement software | REFMAC (5.1.9999) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.280 * | 2.150 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.069 * | 0.431 * |
Total number of observations | 135157 * | |
Number of reflections | 22433 * | |
<I/σ(I)> | 10.9 | 1.7 |
Completeness [%] | 95.3 | 74.9 |
Redundancy | 3.2 | 2.1 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 7.9 * | 277 | 0.1M Citrate pH 5.1, 0.2M NH4OAc, 15% PEG-4000 , VAPOR DIFFUSION,SITTING DROP,NANODROP, temperature 277K, pH 5.10 |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | Tris | 20 (mM) | pH7.9 |
2 | 1 | drop | 150 (mM) | ||
3 | 1 | drop | TCEP | 0.25 (mM) | |
4 | 1 | drop | protein | 18 (mg/ml) | |
5 | 1 | reservoir | PEG4000 | 15 (%) | |
6 | 1 | reservoir | ammonium acetate | 0.2 (M) | |
7 | 1 | reservoir | sodium citrate | 0.1 (M) | pH5.1 |