Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1VIM

Crystal structure of an hypothetical protein

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 32-ID
Synchrotron siteAPS
Beamline32-ID
Detector technologyCCD
DetectorMARRESEARCH
Wavelength(s)0.9794
Spacegroup nameP 21 21 21
Unit cell lengths73.661, 91.829, 101.957
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution32.410 - 1.360
Rwork0.170
R-free0.20200
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.013
RMSD bond angle1.400

*

Data reduction softwareMOSFLM
Data scaling softwareSCALA
Refinement softwareREFMAC (4.0)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]32.4101.430
High resolution limit [Å]1.3601.360
Rmerge0.0710.749
Number of reflections148122
<I/σ(I)>13.72.2
Completeness [%]99.898.7
Redundancy76.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, hanging drop

*

7.5

*

Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropHEPES10 (mM)pH7.5
21drop150 (mM)
31dropmethionine10 (mM)
41dropglycerol10 (%)
51dropdithiothreitol5 (mM)
61dropprotein10 (mg/ml)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon