1V7O
Alanyl-tRNA synthetase editing domain homologue protein from Pyrococcus horikoshii
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL38B1 |
Synchrotron site | SPring-8 |
Beamline | BL38B1 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2003-10-18 |
Detector | ADSC QUANTUM 4 |
Wavelength(s) | 0.9797, 0.9800, 0.9000 |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 34.191, 88.741, 110.122 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 15.000 - 2.620 |
Rwork | 0.235 |
R-free | 0.27300 |
Structure solution method | MAD |
RMSD bond length | 0.011 |
RMSD bond angle | 1.400 * |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.710 |
High resolution limit [Å] | 2.620 | 2.620 |
Rmerge | 0.081 | 0.394 |
Number of reflections | 10576 | |
<I/σ(I)> | 9.2 | |
Completeness [%] | 99.7 | 99.6 |
Redundancy | 6.3 | 5.8 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 8.6 * | 20 * | PEG 4000, Tris, MPD, pH 8.8, VAPOR DIFFUSION, HANGING DROP, temperature 293.0K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | Tris-HCl | 0.1 (M) | pH8.6 |
2 | 1 | reservoir | PEG4000 | 24 (%(w/v)) | |
3 | 1 | reservoir | MPD | 3 (%(v/v)) |