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1V4J

Crystal Structure of Octaprenyl Pyrophosphate Synthase from Hyperthermophilic Thermotoga maritima V73Y mutant

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU
Temperature [K]100
Detector technologyIMAGE PLATE
DetectorRIGAKU RAXIS IV
Wavelength(s)1.54
Spacegroup nameP 4 21 2
Unit cell lengths150.812, 150.812, 68.864
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution50.000 - 2.850
Rwork0.237
R-free0.27420
Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1v4e
RMSD bond length0.004
RMSD bond angle0.997
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareCNS
Refinement softwareCNS
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]50.0002.950
High resolution limit [Å]2.8502.850
Rmerge0.0700.598
Total number of observations129154

*

Number of reflections18359
<I/σ(I)>16.963.57
Completeness [%]99.9100
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5298Na+Hepes, lithium sulfate, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropTriton X-1000.1 (%)
31reservoirsodium HEPES0.1 (M)pH7.5
41reservoir1.5 (M)

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PDB entries from 2024-05-15

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