1UMN
Crystal structure of Dps-like peroxide resistance protein (Dpr) from Streptococcus suis
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | ELETTRA BEAMLINE 5.2R |
Synchrotron site | ELETTRA |
Beamline | 5.2R |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-02-15 |
Detector | MARRESEARCH |
Spacegroup name | P 21 21 21 |
Unit cell lengths | 104.735, 138.168, 142.707 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 18.080 - 1.950 |
R-factor | 0.185 |
Rwork | 0.185 |
R-free | 0.22400 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1qgh |
RMSD bond length | 0.009 |
RMSD bond angle | 1.200 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.010 |
High resolution limit [Å] | 1.950 | 1.950 |
Rmerge | 0.056 | 0.272 |
Number of reflections | 146502 | |
<I/σ(I)> | 12 | 1.7 |
Completeness [%] | 97.7 | 91.3 |
Redundancy | 6.3 | 4.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 7.4 | 289 | HANGING DROP METHOD 2.0 UL 10 MG/ML PROTEIN + 2.0 UL RESERVOUR SOLUTION 27 % PEG 400, 0.2 M CACL2, 0.1M HEPES-NAOH, PH 7.4 +16C FEW DAYS |