1UDX
Crystal structure of the conserved protein TT1381 from Thermus thermophilus HB8
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | SPRING-8 BEAMLINE BL44B2 |
Synchrotron site | SPring-8 |
Beamline | BL44B2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-10-19 |
Detector | MARRESEARCH |
Spacegroup name | P 65 |
Unit cell lengths | 65.332, 65.332, 201.709 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 49.350 - 2.070 |
R-factor | 0.226 |
Rwork | 0.226 |
R-free | 0.27900 * |
Structure solution method | MIR |
RMSD bond length | 0.005 |
RMSD bond angle | 23.400 * |
Data reduction software | HKL-2000 |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.140 |
High resolution limit [Å] | 2.070 | 2.070 |
Rmerge | 0.044 * | 0.328 * |
Number of reflections | 29509 | |
Completeness [%] | 99.3 | 100 |
Redundancy | 5.5 * |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 20 * | MPD, Sodium acetate, sodium chloride, sodium citrate, sodium cacodylate, iso-propanol, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
1 | VAPOR DIFFUSION, HANGING DROP | 4.6 | 20 * | MPD, Sodium acetate, sodium chloride, sodium citrate, sodium cacodylate, iso-propanol, pH 4.6, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 5 (mg/ml) | diluted with MilliQ water |
2 | 1 | reservoir | MPD | 7.5 (%(v/v)) | |
3 | 1 | reservoir | sodium acetate | 25 (mM) | pH4.6 |
4 | 1 | reservoir | 10 (mM) |