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1UA4

Crystal Structure of an ADP-dependent Glucokinase from Pyrococcus furiosus

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsPHOTON FACTORY BEAMLINE BL-6A
Synchrotron sitePhoton Factory
BeamlineBL-6A
Detector technologyCCD
Wavelength(s)1.00
Spacegroup nameI 2 2 2
Unit cell lengths112.677, 88.948, 103.355
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution23.900

*

- 1.900
R-factor0.168
Rwork0.168
R-free0.20500
Structure solution methodMOLECULAR REPLACEMENT
RMSD bond length0.005

*

RMSD bond angle1.200

*

Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
High resolution limit [Å]1.9001.900

*

Rmerge0.060

*

0.230

*

Total number of observations167801

*

Number of reflections41349
Completeness [%]99.9
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion, sitting drop

*

6.525

*

citrate, DTT, glucose, AMP, pH 6.5, VAPOR DIFFUSION, HANGING DROP, temperature 298K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropprotein10 (mg/ml)
21dropADP-beta-S6 (mM)
31dropglucose30 (mM)
41reservoircitrate1.6 (M)pH6.5
51reservoirdithiothreitol10 (mM)

220113

PDB entries from 2024-05-22

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