1SPX
Crystal Structure of Glucose Dehydrogenase of Caenorhabditis Elegans in the Apo-Form
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 100 |
Detector technology | IMAGE PLATE |
Collection date | 2004-03-12 |
Detector | RIGAKU RAXIS IV |
Wavelength(s) | 1.54 |
Spacegroup name | I 2 2 2 |
Unit cell lengths | 64.682, 89.287, 108.153 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 19.540 - 2.100 |
R-factor | 0.202 |
Rwork | 0.202 |
R-free | 0.25000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | Starting model was a homology model from Swiss-Model based on PDB entries 1RWB and 1G6K |
RMSD bond length | 0.005 |
RMSD bond angle | 1.200 |
Data scaling software | SCALEPACK |
Phasing software | MOLREP |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 50.000 | 2.180 |
High resolution limit [Å] | 2.100 | 2.100 |
Rmerge | 0.086 | 0.239 |
Number of reflections | 17897 | |
<I/σ(I)> | 16.4 | |
Completeness [%] | 95.4 | 79.4 |
Redundancy | 7.7 | 4 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 8 | 295 | 2M Ammonium Sulfate, 5% Isopropanol, pH 8.0, VAPOR DIFFUSION, SITTING DROP, temperature 295K |