1SKG
Structure-based rational drug design: Crystal structure of the complex formed between Phospholipase A2 and a pentapeptide Val-Ala-Phe-Arg-Ser
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | SYNCHROTRON |
Source details | EMBL/DESY, HAMBURG BEAMLINE X11 |
Synchrotron site | EMBL/DESY, HAMBURG |
Beamline | X11 |
Temperature [K] | 200 |
Detector technology | CCD |
Collection date | 2003-09-29 |
Detector | MARRESEARCH |
Wavelength(s) | 0.803 |
Spacegroup name | P 43 |
Unit cell lengths | 52.350, 52.350, 47.828 |
Unit cell angles | 90.00, 90.00, 90.00 |
Refinement procedure
Resolution | 20.000 - 1.210 |
R-factor | 0.1433 |
Rwork | 0.141 |
R-free | 0.18330 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1fb2 |
RMSD bond length | 0.013 |
RMSD bond angle | 0.030 |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | SHELXL-97 |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 1.230 |
High resolution limit [Å] | 1.200 | 1.200 |
Number of reflections | 39363 | |
<I/σ(I)> | 16.6 | 4.8 |
Completeness [%] | 99.5 | 97.9 |
Redundancy | 9.9 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 7 | 298 | 0.2M Ammonium sulphate, 30% PEG, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 298.0K |