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1SH0

Crystal Structure of Norwalk Virus Polymerase (Triclinic)

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU RU300
Temperature [K]110
Detector technologyIMAGE PLATE
Collection date2003-10-15
DetectorMARRESEARCH
Wavelength(s)1.5418
Spacegroup nameP 1
Unit cell lengths55.144, 59.914, 100.095
Unit cell angles104.36, 92.49, 111.91
Refinement procedure
Resolution40.000

*

- 2.170
R-factor0.19716
Rwork0.194
R-free0.25500

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1khv
RMSD bond length0.008
RMSD bond angle1.020

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareBEAST
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]40.0002.250
High resolution limit [Å]2.1702.170
Rmerge0.0420.147
Total number of observations233635

*

Number of reflections572845246

*

<I/σ(I)>24.43.5
Completeness [%]95.186.9
Redundancy4.11.4
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP7.5295PEG 8000, ammonium sulfate, Tris-Cl, glycerol, 2-mercaptoethanol, pH 7.5, VAPOR DIFFUSION, HANGING DROP, temperature 295K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11droppolymerase7 (mg/ml)
21reservoirPEG800024 (%(w/v))
31reservoirammonium sulfate100-200 (mM)
41reservoirTris-Cl50 (mM)pH7.5
51reservoirglycerol15 (%(w/v))
61reservoirCHAPS0.2 (%(w/v))
71reservoir2-mercaptoethanol14 (mM)

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PDB entries from 2024-05-15

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