1SGK
NUCLEOTIDE-FREE DIPHTHERIA TOXIN
Experimental procedure
| Temperature [K] | 94 |
| Detector technology | IMAGE PLATE |
| Collection date | 1994-04-15 |
| Detector | RIGAKU |
| Spacegroup name | C 1 2 1 |
| Unit cell lengths | 105.200, 91.200, 65.300 |
| Unit cell angles | 90.00, 94.20, 90.00 |
Refinement procedure
| Resolution | 8.000 - 2.300 |
| R-factor | 0.182 |
| Rwork | 0.182 |
| R-free | 0.28200 |
| Structure solution method | MOLECULAR REPLACEMENT |
| Starting model (for MR) | DT-DIMER APUP COMPLEX (PDB ENTRY 1DDT) |
| RMSD bond length | 0.010 |
| RMSD bond angle | 1.500 |
| Data reduction software | R-AXIS |
| Data scaling software | R-AXIS |
| Phasing software | X-PLOR (3.1) |
| Refinement software | X-PLOR (3.1) |
Data quality characteristics
| Overall | Outer shell | |
| Low resolution limit [Å] | 2.400 | |
| High resolution limit [Å] | 2.300 * | 2.300 |
| Rmerge | 0.066 | 0.239 |
| Total number of observations | 74281 * | |
| Number of reflections | 26627 | |
| <I/σ(I)> | 9.6 | 2.6 |
| Completeness [%] | 95.7 | 92.7 |
| Redundancy | 2.8 |
Crystallization Conditions
| crystal ID | method | pH | temperature | details |
| 1 | VAPOR DIFFUSION, HANGING DROP | 7.5 | HANGING DROP, 12 % PEG8000, 0.43M NACL, 0.043M TRIS, PH 7.5, vapor diffusion - hanging drop |
Crystallization Reagents in Literatures
| ID | crystal ID | solution | reagent name | concentration (unit) | details |
| 1 | 1 | reservoir | PEG8000 | 12 (%(w/v)) | |
| 2 | 1 | reservoir | 0.43 (M) | ||
| 3 | 1 | reservoir | Tris | 0.043 (M) | |
| 4 | 1 | drop | DT | 25 (mg/ml) | |
| 5 | 1 | drop | PEG8000 | 14 (%(w/v)) | |
| 6 | 1 | drop | 0.5 (M) | ||
| 7 | 1 | drop | Tris | 0.05 (M) |






