1SDX
Crystal structure of the zinc saturated C-terminal half of bovine lactoferrin at 2.0 A resolution reveals two additional zinc binding sites
Experimental procedure
Experimental method | SINGLE WAVELENGTH |
Source type | ROTATING ANODE |
Source details | RIGAKU RU200 |
Temperature [K] | 283 |
Detector technology | IMAGE PLATE |
Collection date | 2004-01-31 |
Detector | MARRESEARCH |
Spacegroup name | P 1 21 1 |
Unit cell lengths | 63.210, 50.570, 66.170 |
Unit cell angles | 90.00, 107.64, 90.00 |
Refinement procedure
Resolution | 20.000 * - 2.000* |
R-factor | 0.192 |
Rwork | 0.192 |
R-free | 0.21000 |
Structure solution method | MOLECULAR REPLACEMENT |
Starting model (for MR) | 1nkx |
RMSD bond length | 0.009 |
RMSD bond angle | 23.900 * |
Data scaling software | SCALEPACK |
Phasing software | AMoRE |
Refinement software | CNS (0.9) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 20.000 | 2.100 |
High resolution limit [Å] | 2.000 * | 2.060 |
Rmerge | 0.079 * | 0.315 * |
Total number of observations | 140559 * | |
Number of reflections | 24896 | |
<I/σ(I)> | 14.7 | 2.2 |
Completeness [%] | 91.0 | 75 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | Vapor diffusion * | 6.5 * | 298 | 0.1M MES, 25% polyethylene glycol monomethylether 550, 0.01M zinc sulphate heptahydrate, pH 4.0, VAPOR DIFFUSION, HANGING DROP, temperature 298K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | drop | protein | 50 (mg/ml) | |
2 | 1 | reservoir | MES | 0.1 (M) | pH6.5 |
3 | 1 | reservoir | PEG550 MME | 25 (%(v/v)) | |
4 | 1 | reservoir | zinc sulfate heptahydrate | 0.01 (M) |