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1S8I

Crystal structure of Lys49-Phospholipase A2 from Agkistrodon contortrix laticinctus, second fatty acid free form

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeROTATING ANODE
Source detailsRIGAKU ULTRAX 18
Temperature [K]100
Detector technologyIMAGE PLATE
Collection date2002-10-20
DetectorMAR scanner 345 mm plate
Wavelength(s)1.5418
Spacegroup nameP 41 21 2
Unit cell lengths70.570, 70.570, 57.450
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution26.500

*

- 1.610

*

R-factor0.1867
Rwork0.186
R-free0.20500

*

Structure solution methodSulfur-SAD at CuKa wavelength
RMSD bond length0.009
RMSD bond angle1.295
Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSHELXD
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]26.500

*

1.650
High resolution limit [Å]1.610

*

1.610

*

Rmerge0.0610.314
Total number of observations526515

*

Number of reflections35959

*

<I/σ(I)>49.58.1
Completeness [%]99.899.8
Redundancy14.614.1
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, HANGING DROP8.5291TRIS-HCl, ammonium sulfate, pH 8.5, VAPOR DIFFUSION, HANGING DROP, temperature 291K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoirammonium sulfate2.0 (M)
21reservoirTris-HCl0.1 (M)pH8.5
31dropprotein10 (mg/ml)

219869

PDB entries from 2024-05-15

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