Loading
PDBj
MenuPDBj@FacebookPDBj@TwitterPDBj@YouTubewwPDB FoundationwwPDB
RCSB PDBPDBeBMRBAdv. SearchSearch help

1RUN

CATABOLITE GENE ACTIVATOR PROTEIN (CAP)/DNA COMPLEX + ADENOSINE-3',5'-CYCLIC-MONOPHOSPHATE

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsCHESS BEAMLINE F1
Synchrotron siteCHESS
BeamlineF1
Temperature [K]258
Detector technologyIMAGE PLATE
Collection date1993-09-01
DetectorFUJI
Spacegroup nameC 2 2 21
Unit cell lengths136.930, 152.800, 76.000
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution10.000 - 2.700
R-factor0.207

*

Rwork0.207
RMSD bond length0.018

*

RMSD bond angle2.700

*

Data reduction softwarePURDUE (DATA PROCESSING PACKAGE)
Refinement softwareX-PLOR
Data quality characteristics
 Overall
Low resolution limit [Å]40.000
High resolution limit [Å]2.700
Rmerge0.116
Total number of observations48657

*

Number of reflections17777
Completeness [%]83.0
Redundancy2.7
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Vapor diffusion

*

6.54

*

pH 6.50
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11dropCAP0.1-0.2 (mM)
101reservoircAMP2 (mM)
111reservoirn-octyl-beta-D-glucopyranoside0.3 (%(w/v))
121reservoirPRG33506.5 (%(w/v))
131dropwell buffer50 (%)
21dropDNA molecule 31-2E1.2- to 1.5-molar excess
31reservoirMes-NaOH50 (mM)
41reservoir200 (mM)
51reservoir100 (mM)
61reservoir100 (mM)
71reservoir0.02 (%(w/v))
81reservoirdithiothreitol2 (mM)
91reservoirspermine2 (mM)

219869

PDB entries from 2024-05-15

PDB statisticsPDBj update infoContact PDBjnumon