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1R6W

Crystal structure of the K133R mutant of o-Succinylbenzoate synthase (OSBS) from Escherichia coli. Complex with SHCHC

Experimental procedure
Experimental methodSINGLE WAVELENGTH
Source typeSYNCHROTRON
Source detailsAPS BEAMLINE 14-BM-D
Synchrotron siteAPS
Beamline14-BM-D
Temperature [K]150
Wavelength(s)0.9790
Spacegroup nameP 21 21 2
Unit cell lengths72.200, 82.900, 56.200
Unit cell angles90.00, 90.00, 90.00
Refinement procedure
Resolution30.000 - 1.620
R-factor0.1691
Rwork0.167
R-free0.20000

*

Structure solution methodMOLECULAR REPLACEMENT
Starting model (for MR)1fhv
RMSD bond length0.016
RMSD bond angle1.620

*

Data reduction softwareHKL-2000
Data scaling softwareSCALEPACK
Phasing softwareMOLREP
Refinement softwareREFMAC (5.1.24)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]31.300

*

1.680
High resolution limit [Å]1.6201.620
Rmerge0.0460.293
Total number of observations307914

*

Number of reflections43694
<I/σ(I)>4117.1
Completeness [%]99.8

*

99.9

*

Redundancy7.05

*

Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1Batch method

*

5.520

*

The K133R mutant of OSBS was concentrated to 15 mg/ml, dialyzed against 5 mM Tris pH 8.3 containing 2 mM MgCl2, drop frozen as small pellets in liquid nitrogen and stored at -80 C. Crystals were grown at 20 C by small-scale batch experiments by combining 15 ml of protein solution and 15 ml of a solution containing 12-13% MePEG 5000, 100 mM sodium acetate, 60 mM MgCl2, at pH 5.5. SHCHC was included in the crystallization at a final concentration of approximately 2.5 mM., microbatch, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
111protein15 (mg/ml)
211Tris-HCl5 (mM)pH8.3
3112 (mM)
411MePEG500012-13 (%)
511sodium acetate100 (mM)
61160 (mM)pH5.5

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PDB entries from 2024-05-15

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