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1R5X

JAMM: A Metalloprotease-like Zinc Site in the Proteasome and Signalosome

Experimental procedure
Experimental methodMAD
Source typeSYNCHROTRON
Source detailsSSRL BEAMLINE BL9-2
Synchrotron siteSSRL
BeamlineBL9-2
Temperature [K]100
Detector technologyCCD
Collection date2002-05-20
DetectorADSC QUANTUM 315
Wavelength(s)0.9790, 0.9792, 0.9184
Spacegroup nameP 65
Unit cell lengths76.161, 76.161, 92.124
Unit cell angles90.00, 90.00, 120.00
Refinement procedure
Resolution35.190 - 2.300
R-factor0.263
Rwork0.263
R-free0.30400

*

Structure solution methodMAD
RMSD bond length0.006
RMSD bond angle1.210

*

Data reduction softwareDENZO
Data scaling softwareSCALEPACK
Phasing softwareSOLVE
Refinement softwareCNS (1.1)
Data quality characteristics
 OverallOuter shell
Low resolution limit [Å]38.0002.380
High resolution limit [Å]2.3002.300
Rmerge0.094

*

0.379

*

Total number of observations278220

*

Number of reflections13506
<I/σ(I)>4.71.8
Completeness [%]99.9
Redundancy20.6
Crystallization Conditions
crystal IDmethodpHtemperaturedetails
1VAPOR DIFFUSION, SITTING DROP5293ammonium di-hydrogen phosphate, sodium citrate, pH 5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
1VAPOR DIFFUSION, SITTING DROP5293ammonium di-hydrogen phosphate, sodium citrate, pH 5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
1VAPOR DIFFUSION, SITTING DROP5293ammonium di-hydrogen phosphate, sodium citrate, pH 5, VAPOR DIFFUSION, SITTING DROP, temperature 293K
Crystallization Reagents in Literatures
IDcrystal IDsolutionreagent nameconcentration (unit)details
11reservoir100 (mM)
21reservoirsodium cirtate200 (mM)pH5.
31dropprotein30 (mg/ml)

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PDB entries from 2024-05-15

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