1R5X
JAMM: A Metalloprotease-like Zinc Site in the Proteasome and Signalosome
Experimental procedure
Experimental method | MAD |
Source type | SYNCHROTRON |
Source details | SSRL BEAMLINE BL9-2 |
Synchrotron site | SSRL |
Beamline | BL9-2 |
Temperature [K] | 100 |
Detector technology | CCD |
Collection date | 2002-05-20 |
Detector | ADSC QUANTUM 315 |
Wavelength(s) | 0.9790, 0.9792, 0.9184 |
Spacegroup name | P 65 |
Unit cell lengths | 76.161, 76.161, 92.124 |
Unit cell angles | 90.00, 90.00, 120.00 |
Refinement procedure
Resolution | 35.190 - 2.300 |
R-factor | 0.263 |
Rwork | 0.263 |
R-free | 0.30400 * |
Structure solution method | MAD |
RMSD bond length | 0.006 |
RMSD bond angle | 1.210 * |
Data reduction software | DENZO |
Data scaling software | SCALEPACK |
Phasing software | SOLVE |
Refinement software | CNS (1.1) |
Data quality characteristics
Overall | Outer shell | |
Low resolution limit [Å] | 38.000 | 2.380 |
High resolution limit [Å] | 2.300 | 2.300 |
Rmerge | 0.094 * | 0.379 * |
Total number of observations | 278220 * | |
Number of reflections | 13506 | |
<I/σ(I)> | 4.7 | 1.8 |
Completeness [%] | 99.9 | |
Redundancy | 20.6 |
Crystallization Conditions
crystal ID | method | pH | temperature | details |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | ammonium di-hydrogen phosphate, sodium citrate, pH 5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | ammonium di-hydrogen phosphate, sodium citrate, pH 5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
1 | VAPOR DIFFUSION, SITTING DROP | 5 | 293 | ammonium di-hydrogen phosphate, sodium citrate, pH 5, VAPOR DIFFUSION, SITTING DROP, temperature 293K |
Crystallization Reagents in Literatures
ID | crystal ID | solution | reagent name | concentration (unit) | details |
1 | 1 | reservoir | 100 (mM) | ||
2 | 1 | reservoir | sodium cirtate | 200 (mM) | pH5. |
3 | 1 | drop | protein | 30 (mg/ml) |